iPlant Open Source

From the beginning, iPlant has had a commitment to release all code we produce with an open source software license. This is enshrined in our agreement with the National Science Foundation. This page lists code that we have produced and that is currently available. It also describes details of interest.

Repository for most of our code:
GitHub for iPlant Collaborative Open Source

Some of the linked code below is hosted elsewhere.

Released Code

This list is current, as of 1/27/2012.

• Atmodroid
• broadcasters
• CAS-Extensions
• Clavin
• clj-jargon
• Conrad
• datamatch
• de-authn
• de-base-services-pom
• de-buggalo
• de-business
• de-common-module
• de-database-schema
• de-files
• de-webapp
• de-widgets-module
• filetool
• GWT Phylogenetic Tree Viewer
• hibernatetoolkit
• idpauthn
• iPlant-Atmosphere
• iplant-clojure-commons
• iplant-email
• iplant-monitor
• irodsfile
• JEX
• jlrproxytoolkit
• JSON-java
• jsonutil-module
• metadactyl
• muletoolkit
• Nibblonian
• NotificationAgent
• OSM
• Panopticon
• PeakRanger
• Phyloparser Library
• saml
• Scruffian
• Tito
• Tree Reconciliation Viewer
• Tree Reconciliation Backend Services
• Taxonomic Name Resolution Service
• ui-applications-module
• ui-commons-module
• ui-metadata-module
• ui-pipelines-module
• zoidberg

License

Unless noted otherwise, iPlant code is released using this standard BSD license, which is an Open Source Initiative-approved license.  Exceptions are noted in code repository LICENSE files.

Installation and Use

Instructions for installation, dependencies, and use for each are included in the README file for each item, or if complicated, in a separate INSTALL file.

Asking Questions and Filing Bugs

Use our iPlant Help and Discussion web forums to ask questions. Post a question in the General Questions and Discussion category and we will research the issue and get back to you.

For other questions, email opensource@iplantcollaborative.org

Submitting Code

iPlant requires all outside collaborators (those not employed by iPlant) to sign and submit a Contributor License Agreement. Click for details as well as answers to Frequently Asked Questions about this agreement.

Other steps in the process are still being created. While this message remains, email
opensource@iplantcollaborative.org

iPlant Contributions to Other Open Source Software

Not only does iPlant create open source code, but we contribute to other projects that benefit us. Click for a list of contributions made by iPlant.