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DNA Subway
DNA Subway makes high-level genome analysis broadly available to students and educators and provides easy access to the types of data and informatics tools that drive modern biology. Using the intuitive metaphor of a subway map, DNA Subway organizes research-grade bioinformatics analysis tools into logical workflows and presents them in an appealing interface.
By "riding" different lines users can:
- Predict and annotate genes in up to 150,000 base pairs of DNA sequence (Red Line).
- Prospect entire plant genomes for related genes and sequences (Yellow Line).
- Determine sequence relationships, view phylogenetic trees and analyze "DNA barcodes" (Blue Line).
Take a ride on DNA Subway, take a look at the manual, or attend a training workshop on how to teach genomics using DNA Subway.
Development Team
| Name | Role | Institution | |
|---|---|---|---|
| David Micklos | Lead, Education, Outreach and Training (EOT) |
iPlant Collaborative, Cold Spring Harbor Laboratory | |
| Uwe Hilgert | EOT Project Manager | iPlant Collaborative, The University of Arizona | |
| Cornel Ghiban | EOT Senior Software Developer | iPlant Collaborative, Cold Spring Harbor Laboratory | |
| Mohammed Khalfan | EOT Software Engineer | iPlant Collaborative, Cold Spring Harbor Laboratory | |
| Jason Williams | EOT Partnership Coordinator | iPlant Collaborative, Cold Spring Harbor Laboratory | |